CRAN/E | CDROM

CDROM

Phylogenetically Classifies Retention Mechanisms of Duplicate Genes from Gene Expression Data

Installation

About

Classification is based on the recently developed phylogenetic approach by Assis and Bachtrog (2013). The method classifies the evolutionary mechanisms retaining pairs of duplicate genes (conservation, neofunctionalization, subfunctionalization, or specialization) by comparing gene expression profiles of duplicate genes in one species to those of their single- copy ancestral genes in a sister species.

Key Metrics

Version 1.1
R ≥ 3.2.0
Published 2016-04-27 2912 days ago
Needs compilation? no
License GPL-2
CRAN checks CDROM results

Downloads

Yesterday 1
Last 7 days 6 -45%
Last 30 days 24 -14%
Last 90 days 153 +38%
Last 365 days 1.108 -68%

Maintainer

Maintainer

Raquel Assis

rassis@psu.edu

Authors

Brent Perry
Raquel Assis

Material

Reference manual
Package source

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

CDROM archive

Depends

R ≥ 3.2.0

Imports

graphics
grDevices
stats
utils