CRAN/E | BPEC

BPEC

Bayesian Phylogeographic and Ecological Clustering

Installation

About

Model-based clustering for phylogeographic data comprising mtDNA sequences and geographical locations along with optional environmental characteristics, aiming to identify migration events that led to homogeneous population clusters. The package vignette, I. Manolopoulou, A. Hille, B. C. Emerson (2020) doi:10.18637/jss.v092.i03, provides detailed descriptions of the package.

Citation BPEC citation info

Key Metrics

Version 1.3.1
R ≥ 3.5.0
Published 2020-03-02 1306 days ago
Needs compilation? yes
License GPL-2
CRAN checks BPEC results

Downloads

Last 24 hours 1 -92%
Last 7 days 39 +50%
Last 30 days 77 -1%
Last 90 days 204 -18%
Last 365 days 1.330 -72%

Maintainer

Maintainer

Ioanna Manolopoulou

ioanna.manolopoulou@gmail.com

Authors

Ioanna Manolopoulou
Axel Hille

Material

README
Reference manual
Package source

Vignettes

User manual

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

BPEC archive

Depends

R ≥ 3.5.0

Imports

ggplot2
igraph
mvtnorm
maptools
sp
phytools
fields
coda
methods
OpenStreetMap
ggmap
ape
utils