CRAN/E | ANTs

ANTs

Animal Network Toolkit Software

Installation

About

How animals interact and develop social relationships in face of sociodemographic and ecological pressures is of great interest. New methodologies, in particular Social Network Analysis (SNA), allow us to elucidate these types of questions. However, the different methodologies developed to that end and the speed at which they emerge make their use difficult. Moreover, the lack of communication between the different software developed to provide an answer to the same/different research questions is a source of confusion. The R package Animal Network Toolkit 'ANTs' was developed with the aim of implementing in one package the different social network analysis techniques currently used in the study of animal social networks. Hence, ANT is a toolkit for animal research allowing among other things to: 1) measure global, dyadic and nodal networks metrics; 2) perform data randomization: pre- and post-network (node and link permutations); 3) perform statistical permutation tests as correlation test (doi:10.2307/2332226), t-test (doi:10.1037/h0041412), General Linear Model (doi:10.2307/2346786), General Linear Mixed Model (doi:10.2307/2346786), deletion simulation (doi:10.1098/rsbl.2003.0057), 'Matrix TauKr correlations' (doi:10.1016/S0022-5193(05)80036-0). The package is partially coded in C++ using the R package 'Rcpp' for an optimal coding speed. The package gives researchers a workflow from the raw data to the achievement of statistical analyses, allowing for a multilevel approach (doi:10.1007/978-3-319-47829-6_1882-1): from the individual's position and role within the network, to the identification of interaction patterns, and the study of the overall network properties. Furthermore, ANT also provides a guideline on the SNA techniques used: 1) from the appropriate randomization technique according to the data collected; 2) to the choice, the meaning, the limitations and advantages of the network metrics to apply, 3) and the type of statistical tests to run. The ANT project is multi-collaborative, aiming to provide access to advanced social network analysis techniques and to create new ones that meet researchers' needs in future versions. The ANT project is multi-collaborative, aiming to provide access to advanced social network analysis techniques and to create new ones that meet researchers' needs in future versions.

Citation ANTs citation info
www.s-sosa.com/softwares or github.com/SebastianSosa/ANTs
System requirements C++11
Bug report File report

Key Metrics

Version 0.0.16
R ≥ 3.5.0
Published 2022-07-02 662 days ago
Needs compilation? yes
License GPL (≥ 3)
CRAN checks ANTs results

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Maintainer

Maintainer

Sosa Sebastian

s.sosa@live.fr

Authors

Sosa Sebastian

aut / cre

Puga-Gonzalez Ivan

aut

Hu Feng He

aut

Pansanel Jerome

aut

Xiaohua Xie

aut

Sueur Cedric

aut

Material

Reference manual
Package source

Vignettes

ANTs analytical.protocols

macOS

r-release

arm64

r-oldrel

arm64

r-release

x86_64

r-oldrel

x86_64

Windows

r-devel

x86_64

r-release

x86_64

r-oldrel

x86_64

Old Sources

ANTs archive

Depends

R ≥ 3.5.0

Imports

lme4
methods
Kendall
gtools
rstudioapi

Suggests

testthat
knitr
rmarkdown
markdown

LinkingTo

Rcpp
RcppArmadillo
RcppEigen